Run Modules - Applied Biosystems 3500 User Manual

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Run modules

Table 5 Sequencing analysis run modules
Run module
type
Short read ShortReadSeq50_POP7
sequencing
ShortReadSeq50_POP7xl
Short read BDxShortReadSeq50_POP7
sequencing
BDxShortReadSeq50_POP7xl
BigDye
XTerminator ™
Rapid RapidSeq50_POP6
sequencing
RapidSeq50_POP6xl
RapidSeq50_POP7
RapidSeq50_POP7xl
Rapid RapidSeq36_POP4
sequencing
RapidSeq36_POP4xl
RapidSeq36_POP6
RapidSeq36_POP6xl
RapidSeq36_POP7
RapidSeq36_POP7xl
Rapid BDxRapidSeq50_POP6
sequencing
BDxRapidSeq50_POP6xl
BigDye
XTerminator ™
BDxRapidSeq50_POP7
BDxRapidSeq50_POP7xl
Rapid BDxRapidSeq36_POP4
sequencing
BDxRapidSeq36_POP4xl
BigDye
™
XTerminator
3500/3500xL Genetic Analyzer User Guide—Data Collection Software v3.1
Run modules and dye sets
Run module name
Configuration 23 hours Throughput
Cap. Run
Polymer
length time
type
(cm) (min)
50 POP-7 ™ £30
50 POP-7 ™ £30
™
50 POP-6 £65
50 POP-7 ™
£40
36 POP-4 ™
£45
36 POP-6 ™
£65
36 POP-7 ™
£30
50 POP-6 ™
£65
50 POP-7 ™
£40
36 POP-4 ™
£45
Perfor-
[1]
mance
Contig.
3500 3500xL Read
(8‑cap.) (24-cap.) Length
(CRL)
³368 ³1104 ³300
³368 ³1104 ³300
³168 ³504 ³450
³280 ³840 ³500
³240 ³720 ³400
³168 ³504 ³600
³368 ³1104 ³600
³168 ³504 ³450
³280 ³840 ³500
³240 ³720 ³400
[2]
281